Assoc. Prof. AYŞENUR EMİNOĞLU


Fen Edebiyat Fakültesi, Biyoloji Bölümü

Moleküler Biyoloji Anabilim Dalı


WoS Research Areas: Natural Sciences (Sci), Life Sciences (Life), Biology & Biochemistry, Molecular Biology & Genetics, Energy & Fuels, Engineering, Biochemistry & Molecular Biology, Biotechnology & Applied Microbiology, Multidisciplinary Sciences

Scopus Research Areas: Biochemistry (medical), General Engineering, Molecular Biology, Genetics, Biotechnology, General Biochemistry, Genetics and Molecular Biology, Multidisciplinary

Avesis Research Areas: Metabolic Engineering, Biofuels, Biotechnology and Genetics, Molecular Biotechnology, Bioinformatics, Biological Modelling, Biological Databases, Molecular Biochemistry, Microbial Biotechnology, Molecular Biology and Genetics, Plant Molecular Genetics, Genetic Engineering

Office Phone: +90 464 223 4093 Extension: 1842
Office: Biyoloji Bölümü (4. Kat) 426 nolu ofis
Address: Recep Tayyip Erdoğan Üniversitesi Fen Edebiyat Fakültesi Kat: 4 Biyoloji Bölümü 53100 Fener/RİZE

Metrics

Publication

29

Publication (WoS)

11

Publication (Scopus)

11

Citation (WoS)

52

H-Index (WoS)

4

Citation (Scopus)

52

H-Index (Scopus)

5

H-Index (Scholar)

5

Citation (TrDizin)

1

H-Index (TrDizin)

1

Citation (Sum Other)

12

Project

12

Intellectual Property

1

Thesis Advisory

2

Open Access

4
UN Sustainable Development Goals

Education

2013 - 2018

2013 - 2018

Doctorate

Karadeniz Technical University, Fen Bilimleri Enstitüsü, Biyoloji/Moleküler Biyoloji, Turkey

2015 - 2017

2015 - 2017

Doctorate

Dartmouth College, Thayer School Of Engineering , Chemical And Biochemical Engineering / Energy Technologies , United States Of America

2010 - 2012

2010 - 2012

Postgraduate

Recep Tayyip Erdogan University, Fen Bilimleri Enstitüsü, Biyoloji Anabilimdalı / Moleküler Biyoloji , Turkey

2003 - 2004

2003 - 2004

Postgraduate

Selcuk University, Instıtute Of Scıence, Ortaöğretim Fen Ve Matematik Alanları Eğitimi, Turkey

1999 - 2003

1999 - 2003

Undergraduate

Selcuk University, Fen Edebiyat Fakültesi, Biyoloji, Turkey

Dissertations

2018

2018

Doctorate

Modification of Hydrogen Metabolism for Improved Ethanol Production in Thermophilic Bacteria (İngilizce)

Karadeniz Technical University, Fen Bilimleri Enstitüsü, BİYOLOJİ/ MOLKEÜLER BİYOLOJİ

2012

2012

Postgraduate

Anoxybacillus flavithermus WK1 AfCDA geninin klonlanması, ekspresyonu, saflaştırılması ve biyokimyasal karakterizasyonu

Recep Tayyip Erdogan University, Fen Bilimleri Enstitüsü, Biyoloji Anabilimdalı / Moleküler Biyoloji Bilim Dalı

Foreign Languages

C1 Advanced

C1 Advanced

English

Certificates, Courses and Trainings

2014

2014

Bitki Biyoteknolojisinde DNA Markır Uygulamaları ve Gen İfadesi Analiz Yöntemleri

Vocational Course

Ankara Üniversitesi Biyoteknoloji Enstitüsü

2009

2009

Bilgisayar İşletmenliği

IT

MEB

Research Areas

Avesis Research Areas: Metabolic Engineering, Biofuels, Biotechnology and Genetics, Molecular Biotechnology, Bioinformatics, Biological Modelling, Biological Databases, Molecular Biochemistry, Microbial Biotechnology, Molecular Biology and Genetics, Plant Molecular Genetics, Genetic Engineering
WoS Research Areas: Natural Sciences (Sci), Life Sciences (Life), Biology & Biochemistry, Molecular Biology & Genetics, Energy & Fuels, Engineering, Biochemistry & Molecular Biology, Biotechnology & Applied Microbiology, Multidisciplinary Sciences
Scopus Research Areas: Biochemistry (medical), General Engineering, Molecular Biology, Genetics, Biotechnology, General Biochemistry, Genetics and Molecular Biology, Multidisciplinary

Research Areas Based on Academic Activities

Avesis Research Areas

    WoS Research Areas

      Scopus Research Areas

        Academic Positions

        2026 - Present

        2026 - Present

        Associate Professor

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü

        2022 - Present

        2022 - Present

        Assistant Professor

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü

        2018 - 2022

        2018 - 2022

        Research Assistant PhD

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü

        2011 - 2018

        2011 - 2018

        Research Assistant

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü

        2015 - 2017

        2015 - 2017

        Other

        Dartmouth College, Thayer School Of Engineering / Chemical And Biochemical Engineering / Energy Technologies, Chemical And Biochemical Engineering / Environmental Engineering

        Courses

        Doctorate

        Doctorate

        CRISPR-Cas System and Bacterial Genome Editing

        Postgraduate

        Postgraduate

        Uzmanlık Alan Dersi-II

        Biyoinfotmatik Analizler

        Yüksek Lisans Tezi

        Nükleik Asitler ve Biyomühendislik

        Seminer

        Bakterilerin Moleküler Genetiği

        Moleküler Biyoteknoloji

        Undergraduate

        Undergraduate

        Genetik Mühendisliği

        Mesleki İngilizce-III

        Moleküler Biyoloji

        Biyoteknoloji

        Biyoinformatik

        Biyoproses Mühendisliği

        Moleküler Biyoloji Laboratuvarı

        Taught Courses and Trainings

        2022 - 2022

        2022 - 2022

        Çayda Uygulamalı Moleküler Teknikler Eğitimi I

        Application Research Center - Training

        Eminoğlu A., Beriş F. Ş., Güzel İzmirli Ş.

        Articles

        All (12)
        SCI-E, SSCI, AHCI (11)
        SCI-E, SSCI, AHCI, ESCI (11)
        Scopus (11)
        TRDizin (2)

        Papers Presented at Peer-Reviewed Scientific Conferences

        2026

        2026

        1. Modeling m6A Motif Enrichment in the 3′UTR Regions of Nitrogen Metabolism and Phenylpropanoid Pathway Genes in Tea (Camellia sinensis) Relative to the Genomic Background

        Eminoğlu A.

        13. Uluslararası Ankara Bilimsel Araştırmalar Kongresi, Ankara, Turkey, 1 - 03 March 2026, pp.1-2, (Summary Text)

        2026

        2026

        2. A Regex-Based Screening Model for 8-Ligand Metal-Binding RING and CHY Zinc Finger Domains in the Tea Proteome

        Eminoğlu A.

        8TH INTERNATIONAL BLACK SEA MODERN SCIENTIFIC RESEARCH CONGRESS, Giresun, Turkey, 21 - 22 February 2026, pp.1, (Summary Text) Creative Commons License

        2024

        2024

        3. Doku Kültürüyle Üretilen Türk Çay Genotiplerinde Somaklonal Varyasyonun SSR Markörler Kullanılarak Tespiti

        Eminoğlu A., Güzel İzmirli Ş., Beriş F. Ş., Dinçer D., Yazıcı K.

        7th International Anatolian Agriculture, Food, Environment and Biology Congress, Kastamonu, Turkey, 26 - 29 September 2024, pp.85, (Summary Text) Sustainable Development

        2024

        2024

        6. TÜRKİYE ULUSAL ÇAY GEN HAVUZUNUN KURULMASI

        Yazıcı K., Polat A., Haznedar A., Çeper Ilgaz Ş., Akbulut M., Şavşatlı Y., et al.

        ULUSAL ÇAY KONGRESİ, Rize, Turkey, 21 - 23 May 2024, pp.18-19, (Summary Text) Sustainable Development

        2018

        2018

        7. Camellia sinensis (L.) Kuntze (Çay) Bitkisine Ait Sitokrom P450 Monooksijenaz Geninin Genetik Polimorfizminin Belirlenmesi

        EMİNOĞLU A., AKTÜRK DİZMAN Y., GÜZEL Ş.

        1st International Plant Biology Congress (ICONBP), Konya, Turkey, 10 - 12 May 2018, vol.X, (Summary Text)

        2017

        2017

        8. Introducing thermophilic high ethanol-yielding producing pathways into Clostridium thermocellum

        Hon S., Olson D. G., Holwerda E., Murphy S. J., Tian L., Lanahan A., et al.

        39th Symposium on Biotechnology for Fuels and Chemicals (SBFC), California, United States Of America, 1 - 12 May 2017, vol.., pp.1, (Summary Text)

        2016

        2016

        9. Understanding the Role of HfsB in Clostridium thermocellum for Improved Ethanol Production

        Eminoğlu A., Olson D. G., Lynd R. L.

        14th International Conference on the Genetics, Physiology and Synthetic Biology of Solvent- and Acid-forming Clostridia, New Hampshire, United States Of America, 28 - 31 August 2016, vol.14, no.87, pp.62, (Summary Text)

        2016

        2016

        10. Heterologous expression of mutant Thermoanaerobacterium saccharolyticum hfs hydrogenase for improving Ethanol production in ?hydG?ech strain of Clostridium thermocellum

        EMİNOĞLU A., Olson D. G., Beldüz A. O., Lynd R. L.

        5th International Molecular Biology and Biotechnology Congress' 2016, Üsküp, Macedonia, 25 - 29 August 2016, vol.1, no.1, (Summary Text)

        2016

        2016

        11. Understanding the role of the hfs hydrogenase in Thermoanaerobacterium saccharolyticum

        Eminoğlu A., Olson D. G., Lynd R. L.

        2016 SIMB Annual Meeting and Exhibition, Louisiana, United States Of America, 24 - 28 July 2016, vol.1, no.11, pp.1, (Summary Text)

        2015

        2015

        12. Prolin-Kuyruğun Anoxybacillus sp. Litik Murein Transglikosilazın Optimum Sıcaklıkve pH’sı Üzerine Etkisi

        Ceylan E., Eminoğlu A., Güler H. İ., Kurnaz Z., Beldüz A. O.

        3. Ulusal Moleküler Biyoloji ve Biyoteknoloji Kongresi, Afyonkarahisar, Turkey, 21 - 24 August 2015, vol.1, no.1, pp.64, (Summary Text)

        2014

        2014

        13. In silico Analysis and Comparative Modelling of Camellia sinensis Heat Shock Protein 70 (Hsp70)

        Eminoğlu A., Özer A.

        3rd Molecular Biology and Biotechnology Congress, Sarajevo, Bosnia And Herzegovina, 2 - 06 June 2014, vol.1, no.166, pp.220, (Summary Text)

        2014

        2014

        14. Expression and Zymogram Analysis of a ß-class Carbonic Anhydrase from Enterobacter asburiae

        Eminoğlu A., Aşık A., Çolak D. N., Çanakçı S., Beldüz A. O.

        3rd Molecular Biology and Biotechnology Congress, Sarajevo, Bosnia And Herzegovina, 2 - 06 June 2014, vol.1, no.167, pp.219, (Summary Text)

        Funded Projects

        2025 - 2025

        2025 - 2025

        Bilim için Aile, Aile için Bilim Şenliği

        TUBITAK Project , 4007 - Bilim Şenlikleri Destekleme Programı

        Aytan Ü., ALTUN E., EMİNOĞLU A.

        2024 - 2025

        2024 - 2025

        Dini İnancın VMAT1/Slc18a1 ve VMAT2/Slc18a2 Gen Ekspresyonları Üzerine Etkisi

        TUBITAK Project , 1002 - Quick Support Program

        Eminoğlu A. (Executive), Vural M. E.

        2024 - 2025

        2024 - 2025

        DİNİ İNANCIN VMAT2/SLC18A2 GEN EXPRESYONU ÜZERİNE ETKİSİNİN BELİRLENMESİSustainable Development

        Project Supported by Higher Education Institutions , BAP MSc

        (Project Abstract)
        EMİNOĞLU A. (Executive), YILDIZ C., VURAL M. E.

        2024 - 2024

        2024 - 2024

        Concept ConversationsSustainable Development

        Project Supported by Higher Education Institutions , University Supported Other Projects

        (Project Abstract) (Project Final Report) Creative Commons License
        Karadeniz İ., Köse H. İ., Köktaş Y., Eminoğlu A., Alber F.(Executive)

        2020 - 2023

        2020 - 2023

        ÇAY EĞİTİM PROJESİ

        Project Supported by Higher Education Institutions , BAP Other

        YAZICI K. (Executive), BİLGİN A., AKBULUT M., BERİŞ F. Ş., DİNÇER D., ŞAVŞATLI Y., et al.

        2018 - 2020

        2018 - 2020

        Acanthamoeba castellanii Beta-Glukosidaz (Aca1) geni cDNA’sının klonlanması

        Project Supported by Higher Education Institutions , BAP Research Project

        Taşkın Kafa A. H.(Executive), Eminoğlu A., Akın Polat Z.

        Patent

        2020

        2020

        Increased ethanol production by thermophilic microorganisms with deletion of individual hfs hydrogenase subunits

        Patent

        Registered / Approved, The Invention Registration Number: US10619172 , Standard Registration

        Activities in Scientific Journals

        2026 - Present

        2026 - Present

        SCIENTIFIC REPORTS

        Committee Member

        Student Project

        2026 - 2026

        2026 - 2026

        Zanaatın İzinde: Rize Merkez Geleneksel Zanaat Belleği ve Haritalama Çalışması

        Social Project

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü, Turkey

        2026 - 2026

        2026 - 2026

        Şehrin Küçük Sakinleri: Rize Kent Merkezindeki Böcek Çeşitliliğinin iNaturalist ile Belgelenmesi

        Social Project

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü, Turkey

        2026 - 2026

        2026 - 2026

        Kaldırımın Altındaki Orman: Kentsel Mikro-Habitatlar

        Social Project

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü, Turkey

        2026 - 2026

        2026 - 2026

        Engelsiz Rota

        Social Project

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü, Turkey

        Peer Reviews in Scientific Publications

        August 2026

        August 2026

        FOOD RESEARCH INTERNATIONAL

        Journal Indexed in SCI-E

        April 2026

        April 2026

        ECOLOGY AND EVOLUTION

        Journal Indexed in SCI-E

        October 2024

        October 2024

        PARASITOLOGISTS UNITED JOURNAL

        Journal Indexed in ESCI

        November 2023

        November 2023

        PARASITOLOGISTS UNITED JOURNAL

        Journal Indexed in ESCI

        November 2022

        November 2022

        Afyon Kocatepe Üniversitesi Fen ve Mühendislik Bilimleri Dergisi

        National Scientific Refreed Journal

        March 2021

        March 2021

        Recep Tayyip Erdoğan Üniversitesi Fen Ve Mühendislik Bilimleri Dergisi

        National Scientific Refreed Journal

        Scientific Project Refereeing

        August 2026

        August 2026

        Project Supported by Higher Education Institutions

        BAP Research Project, Istanbul University, Turkey

        April 2026

        April 2026

        Project Supported by Higher Education Institutions

        BAP Research Project, Van Yüzüncü Yil University, Turkey

        March 2026

        March 2026

        Project Supported by Higher Education Institutions

        BAP Research Project, Istanbul University, Turkey

        November 2025

        November 2025

        Project Supported by Higher Education Institutions

        BAP Guided, Dokuz Eylul University, Turkey

        October 2022

        October 2022

        Project Supported by Higher Education Institutions

        BAP Research Project, Hacettepe University, Turkey

        December 2020

        December 2020

        Project Supported by Higher Education Institutions

        BAP MSc, Akdeniz University, Turkey

        Scientific Consultations

        2021 - 2022

        2021 - 2022

        Project Consultancy

        TÜBİTAK

        Recep Tayyip Erdogan University, Fen Edebiyat Fakültesi, Biyoloji Bölümü, Turkey

        Roles in Event Organizations

        November 2020

        November 2020

        Uluslararası Biyoçeşitlilik Araştırmaları Sempozyumu Sustainable Development

        Scientific Congress

        Eminoğlu A.
        Rize, Turkey

        Mobility Activity

        2015 - 2017

        2015 - 2017

        Research Scholarship Program

        Research During Graduate Education

        Dartmouth College, United States Of America

        

        Congress and Symposium Activities

        01 August 2016 - 01 August 2016

        01 August 2016 - 01 August 2016

        14th International Conference on the Genetics, Physiology and Synthetic Biology of Solvent- and Acid-forming Clostridia

        Attendee

        New Hampshire-United States Of America

        01 July 2016 - 01 July 2016

        01 July 2016 - 01 July 2016

        SIMB Annual Meeting and Exhibition

        Attendee

        Louisiana-United States Of America

        01 June 2014 - 01 June 2014

        01 June 2014 - 01 June 2014

        3rd Molecular Biology and Biotechnology Congress

        Attendee

        Sarajevo-Bosnia And Herzegovina

        01 September 2012 - 01 September 2012

        01 September 2012 - 01 September 2012

        21. Ulusal Biyoloji Kongresi

        Attendee

        İzmir-Turkey

        Invited Talks

        June 2016

        June 2016

        Engineering the hfs Hydrogenase for Improving Ethanol Production in Thermophilic Bacteria

        Workshop

        10th BioEnergy Science Center (BESC) Retreat, Chattanooga, TN-United States Of America

        Scholarships

        2016 - 2017

        2016 - 2017

        2214-A - Yurt Dışı Doktora Sırası Araştırma Bursu, Dartmouth College, Thayer School of Engineering, USA

        TUBITAK

        Citations

        Total Citations (WOS): 52

        h-index (WOS): 4

        Scientific Research / Working Group Memberships

        2018 - Present

        2018 - Present

        Çay ve Çay Ürünleri Uygulama ve Araştırma Merkezi

        http://cay.idari.erdogan.edu.tr/

        RECEP TAYYİP ERDOĞAN ÜNİVERSİTESİ, Türkiye

        2016 - 2017

        2016 - 2017

        BioEnergy Science Center (BESC)

        http://bioenergycenter.org/besc/

        US Department of Energy, Amerika Birleşik Devletleri